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First of all,, your problem is certainly not your tonsile. Most likely it is your immunne system which is not working properly or you've got some bacteria which your body has problems to deal with.

If brushing yoour teeth helps you so much, I'd advise you to do it not only inn the moornig or at night, but EVERY TIME you eat something.

Second, go check your health with an immunnologist and also a gastroenterologist.

One of them (or both) might help you.